PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012568171.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 261aa    MW: 29168.3 Da    PI: 7.9385
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012568171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.92.8e-1168114354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h e+ErrRR+ri + +++Lr l+P +      K++Ka+ L ++++ +k+L
  XP_012568171.1  68 KNHREAERRRRNRISDHLAKLRGLVPYS-----AKMDKATLLAEVIKQVKEL 114
                     58*************************6.....6************998887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.64665114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.8E-968114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-1269121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.01E-1269122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.6E-1071120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048736.14E-6155196No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MDYGSDISRI VFNAPSYGFG ASNGISRDGL VSPQSLVLDT EMRELVKSPP MVGKKKICDA  60
NKTLVALKNH REAERRRRNR ISDHLAKLRG LVPYSAKMDK ATLLAEVIKQ VKELKKNTEE  120
SSKGYLIPMD NDEVKVEIEP YENGGLNGSI PYKASICCDY RPELLSDLKQ TLDTLKVQLV  180
RAELSTLGDR VKNEFVYTCC KADIYNVELC QIIASNVHQA LSSVLDKGST SLDYSLRVSH  240
SFNQLQHQTS TLSCNHEFCS C
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012568171.10.0PREDICTED: putative transcription factor bHLH107
TrEMBLA0A072V5E01e-137A0A072V5E0_MEDTR; Transcription factor
STRINGGLYMA07G32690.14e-96(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF89863143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-30bHLH family protein